| Species | Name Used in Reference |
|---|---|
| Barbatula barbatula (Linnaeus, 1758) | Barbatula toni (p. ) |
| Cobitis biwae Jordan & Snyder, 1901 | Cobitis biwae (p. ) |
| Lefua nikkonis (Jordan & Fowler, 1903) | Lefua nikkonis (p. ) |
| Misgurnus anguillicaudatus (Cantor, 1842) | Misgurnus anguillicaudatus (p. ) |
| Niwaella delicata (Niwa, 1937) | Cobitis delicata (p. ) |