| Ekosystem | Typ | Status | Ref. |
|---|---|---|---|
| Agnébi | River (basin) | native | 13331 |
| Australian | Zoogeographic realm | introduced | 1739 |
| Bandama | River (basin) | native | 13331 |
| Bia | River (basin) | native | 13331 |
| Comoé | River (basin) | native | 13331 |
| Cross | River (basin) | native | 13331 |
| Ébrié | Lagoon | native | 28587 |
| Ethiopian | Zoogeographic realm | endemic | 272 |
| Nearctic | Zoogeographic realm | introduced | 1739 |
| Niger | River (basin) | native | 53405 |
| Ogun | River (basin) | native | 13331 |
| Ouémé | River (basin) | native | 13331 |
| Palearctic | Zoogeographic realm | introduced | 5163 |
| Sanaga | River (basin) | native | 81260 |
| Tano | River (basin) | native | 13331 |