| Ecosystem | Type | Status | Ref. |
|---|---|---|---|
| Agulhas Current | Sea/Bay/Gulf | native | 9682 |
| Arabian Sea | Sea/Bay/Gulf | native | 9682 |
| Calamianes Islands | Sea/Bay/Gulf | native | 48613 |
| Chilika Lake/Lagoon | Lagoon | native | 29108 |
| Coral Sea and GBR | Sea/Bay/Gulf | native | 2334 |
| East China Sea | Sea/Bay/Gulf | native | 47843 |
| Erh-jen-shi | Sea/Bay/Gulf | native | 43515 |
| Great Barrier Reef | Sea/Bay/Gulf | native | 48497 |
| Indian Ocean | Sea/Bay/Gulf | native | 9682 |
| Indonesian Sea | Sea/Bay/Gulf | native | 7050 |
| Milne Bay | Sea/Bay/Gulf | native | 41464 |
| North Australian Shelf | Sea/Bay/Gulf | native | 2334 |
| Northeast Australian Shelf | Sea/Bay/Gulf | native | 2334 |
| Ormoc Bay | Sea/Bay/Gulf | native | 45205 |
| Pacific Ocean | Sea/Bay/Gulf | native | 9682 |
| Peng-hu Island | Sea/Bay/Gulf | native | 55073 |
| Persian Gulf | Sea/Bay/Gulf | native | 33390 |
| Shark Bay | Sea/Bay/Gulf | native | 115274 |
| Somali Coastal Current | Sea/Bay/Gulf | native | 12484 |
| South China Sea | Sea/Bay/Gulf | native | 36648 |
| Southern China | Sea/Bay/Gulf | native | 31075 |
| Taal Lake | Lake | native | 26282 |