| Ecosystem | Type | Status | Ref. |
|---|---|---|---|
| Bay of Bengal | Sea/Bay/Gulf | native | 74926 |
| Chilika Lake/Lagoon | Lagoon | native | 95460 |
| Indian Ocean | Sea/Bay/Gulf | native | 3607 |
| Indonesian Sea | Sea/Bay/Gulf | native | 5978 |
| North Australian Shelf | Sea/Bay/Gulf | native | 3131 |
| Northeast Australian Shelf | Sea/Bay/Gulf | native | 3131 |
| Northwest Australian Shelf | Sea/Bay/Gulf | native | 3131 |
| Pacific Ocean | Sea/Bay/Gulf | native | 3131 |
| Persian Gulf | Sea/Bay/Gulf | native | 11441 |
| Sikao Creek | River (basin) | native | 52823 |
| South China Sea | Sea/Bay/Gulf | native | 36648 |
| Sulu-Celebes Sea | Sea/Bay/Gulf | native | 7223 |