| Ecosystem | Type | Status | Ref. |
|---|---|---|---|
| Andaman Sea | Sea/Bay/Gulf | native | 48635 |
| Arabian Sea | Sea/Bay/Gulf | native | 559 |
| Calamianes Islands | Sea/Bay/Gulf | native | 48613 |
| Great Barrier Reef | Sea/Bay/Gulf | native | 75154 |
| Indian Ocean | Sea/Bay/Gulf | native | 559 |
| Indonesian Sea | Sea/Bay/Gulf | native | 561 |
| Lingayen Gulf | Sea/Bay/Gulf | native | 43020 |
| Milne Bay | Sea/Bay/Gulf | native | 41464 |
| North Australian Shelf | Sea/Bay/Gulf | native | 3131 |
| Northeast Australian Shelf | Sea/Bay/Gulf | native | 3131 |
| Northwest Australian Shelf | Sea/Bay/Gulf | native | 3131 |
| Ormoc Bay | Sea/Bay/Gulf | native | 45205 |
| Pacific Ocean | Sea/Bay/Gulf | native | 3131 |
| Panguil Bay | Sea/Bay/Gulf | native | 47692 |
| Peng-hu Island | Sea/Bay/Gulf | native | 55073 |
| Persian Gulf | Sea/Bay/Gulf | native | 559 |
| Red Sea | Sea/Bay/Gulf | misidentification | 84159 |
| San Miguel Bay | Sea/Bay/Gulf | native | 45674 |
| South China Sea | Sea/Bay/Gulf | native | 36648 |
| Sulu-Celebes Sea | Sea/Bay/Gulf | native | 2858 |
| Tayabas Bay | Sea/Bay/Gulf | native | 47588 |
| Verde Island Passage | Sea/Bay/Gulf | native | 107853 |
| Yellow Sea | Sea/Bay/Gulf | native | 4868 |