| Ecosystem | Type | Status | Ref. |
|---|---|---|---|
| Agulhas Current | Sea/Bay/Gulf | native | 4281 |
| Arabian Sea | Sea/Bay/Gulf | native | 5316 |
| Chilika Lake/Lagoon | Lagoon | native | 95460 |
| East China Sea | Sea/Bay/Gulf | native | 47843 |
| Ethiopian | Zoogeographic realm | endemic | 5316 |
| Indian Ocean | Sea/Bay/Gulf | native | 5316 |
| Indonesian Sea | Sea/Bay/Gulf | native | 5316 |
| North Australian Shelf | Sea/Bay/Gulf | native | 5316 |
| Northeast Australian Shelf | Sea/Bay/Gulf | native | 5316 |
| Pacific Ocean | Sea/Bay/Gulf | native | 5316 |
| Peng-hu Island | Sea/Bay/Gulf | native | 55073 |
| Persian Gulf | Sea/Bay/Gulf | native | 5316 |
| Red Sea | Sea/Bay/Gulf | native | 84159 |
| Sabaki | River (basin) | native | 30558 |
| Somali Coastal Current | Sea/Bay/Gulf | native | 5316 |
| South China Sea | Sea/Bay/Gulf | native | 36648 |
| Southern China | Sea/Bay/Gulf | native | 94637 |
| Sulu-Celebes Sea | Sea/Bay/Gulf | native | 5316 |
| Tsengwen River | River (basin) | native | 36073 |
| Yellow Sea | Sea/Bay/Gulf | native | 5316 |