| Ecosystem | Type | Status | Ref. |
|---|---|---|---|
| Andaman Sea | Sea/Bay/Gulf | native | 55 |
| Arabian Sea | Sea/Bay/Gulf | native | 55 |
| Australian | Zoogeographic realm | native | 55 |
| Bay of Bengal | Sea/Bay/Gulf | native | 55 |
| Coral Sea and GBR | Sea/Bay/Gulf | native | 48497 |
| Davao Gulf | Sea/Bay/Gulf | native | 43437 |
| Ethiopian | Zoogeographic realm | native | 55 |
| Great Barrier Reef | Sea/Bay/Gulf | native | 48497 |
| Gulf of Aden | Sea/Bay/Gulf | native | 55 |
| Gulf of Aqaba | Sea/Bay/Gulf | native | 58021 |
| Gulf of Oman | Sea/Bay/Gulf | native | 45255 |
| Gulf of Thailand | Sea/Bay/Gulf | native | 55 |
| Indian Ocean | Sea/Bay/Gulf | native | 4320 |
| Indonesian Sea | Sea/Bay/Gulf | native | 55 |
| Milne Bay | Sea/Bay/Gulf | native | 41468 |
| North Australian Shelf | Sea/Bay/Gulf | native | 55 |
| Northeast Australian Shelf | Sea/Bay/Gulf | native | 55 |
| Oriental | Zoogeographic realm | native | 87596 |
| Pacific Ocean | Sea/Bay/Gulf | native | 55 |
| Palearctic | Zoogeographic realm | native | 55 |
| Peng-hu Island | Sea/Bay/Gulf | native | 55073 |
| Persian Gulf | Sea/Bay/Gulf | native | 92948 |
| Red Sea | Sea/Bay/Gulf | native | 84159 |
| Socotra Archipelago | Sea/Bay/Gulf | native | 37631 |
| Somali Coastal Current | Sea/Bay/Gulf | native | 55 |
| South China Sea | Sea/Bay/Gulf | native | 36648 |
| Southern China | Sea/Bay/Gulf | native | 55 |
| Sulu-Celebes Sea | Sea/Bay/Gulf | native | 55 |
| Tañon Strait | Sea/Bay/Gulf | native | 107276 |